SubtiBank SubtiBank
yckC [2019-06-07 08:50:41]
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yckC [2019-06-07 08:50:41]

unknown
locus
BSU03390
pI
7.88
mw
16.84 kDa
protein length
151 aa Sequence Blast
gene length
456 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    369,236 369,691

    The protein

    [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|1CB67586A46A1CC828EC7CEF38EFED11372E2C77|yckC]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|15699190], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]
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    Biological materials

    Mutant

  • MGNA-C054 (yckC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2052 NBRP B. subtilis, Japan]
  • BKE03390 ([gene|1CB67586A46A1CC828EC7CEF38EFED11372E2C77|yckC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE03390 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGACTCCCCATTATGG, downstream forward: _UP4_TAATGGTTCGCTCTTTTTAT
  • BKK03390 ([gene|1CB67586A46A1CC828EC7CEF38EFED11372E2C77|yckC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK03390 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGACTCCCCATTATGG, downstream forward: _UP4_TAATGGTTCGCTCTTTTTAT